| Draft Selection | Draft Source | Position | Player | Age | SI | Pot | Assignment | Team | Statistics | |
|---|---|---|---|---|---|---|---|---|---|---|
| 2068, Rd #8 | High School | OF | Neal Scherer | 19 | 65 → 66 | 10 | Rookie | Albuquerque Chili Peppers | ||
| 2068, Rd #7 | College | P | Dirk Vaught | 23 | 54 → 57 | 11 → 10 | AA | Albuquerque Chili Peppers | ||
| 2068, Rd #5 | College | P | Cliff Thompson | 23 | 45 → 53 | 12 → 11 | AA | Albuquerque Chili Peppers | ||
| 2068, Rd #4 | College | OF | Gordon Peters | 22 | 66 → 73 | 12 → 11 | AAA | Albuquerque Chili Peppers | ||
| 2068, Rd #3 | Latin American Academy | P | Lázaro Hernández | 20 | 37 → 43 | 10 | A | Albuquerque Chili Peppers | ||
| 2068, Rd #2 | High School | OF | Jeff Seidel | 19 | 67 → 71 | 15 | Rookie | Albuquerque Chili Peppers | ||
| 2068, Rd #1 | Latin American Academy | P | Genaro Venegas | 22 | 56 → 65 | 13 | AA | Albuquerque Chili Peppers | ||
| 2067, Rd #6 | College | P | Todd Dykes | 23 | 48 → 63 | 12 | AA | Dallas Dragons | ||
| 2067, Rd #5 | Junior College | SS | Victor Mancini | 21 | 63 → 72 | 11 | AA | Albuquerque Chili Peppers | ||
| 2067, Rd #4 | College | 1B | Justin Carter | 23 | 68 → 81 | 12 → 11 | AAA | Albuquerque Chili Peppers | ||
| 2067, Rd #3 | Latin American Academy | OF | Orlando Acuña | 20 | 74 → 79 | 14 → 13 | Rookie | Albuquerque Chili Peppers | ||
| 2067, Rd #2 | College | OF | Rodger Chance | 23 | 65 → 75 | 13 → 12 | AA | Albuquerque Chili Peppers | ||
| 2067, Rd #1 | College | P | Emilio De La Torre | 23 | 64 → 82 | 12 | AA | Albuquerque Chili Peppers | ||
| 2066, Rd #8 | High School | P | Alejandro Osorio | 21 | 35 → 37 | 11 | - | - | ||
| 2066, Rd #5 | High School | 2B | Casey Dodd | 21 | 62 → 77 | 12 → 11 | AA | Albuquerque Chili Peppers | ||
| 2066, Rd #4 | College | 1B | Alexander Oh | 25 | 67 → 69 | 12 | - | - | ||
| 2066, Rd #3 | College | OF | Henry Casey | 24 | 68 → 83 | 13 → 12 | AAA | Albuquerque Chili Peppers | ||
| 2066, Rd #2 | College | P | Sid Lance | 25 | 57 → 86 | 12 → 11 | Majors | Corvallis Ravens | ||
| 2066, Rd #1 | High School | P | Mark Sinclair | 21 | 35 → 53 | 11 → 12 | A | Albuquerque Chili Peppers | ||
| 2065, Rd #5 | Junior College | 3B | Jose Ordonez | 23 | 66 → 87 | 11 → 12 | AAA | Albuquerque Chili Peppers | ||
| 2065, Rd #4 | Latin American Academy | OF | Cristian Fernández | 25 | 77 → 97 | 12 → 13 | AAA | Albuquerque Chili Peppers | ||
| 2065, Rd #3 | High School | OF | Joel Murdock | 22 | 64 → 84 | 9 → 11 | AAA | Albuquerque Chili Peppers | ||
| 2065, Rd #2 | High School | 2B | Deandre Barnes | 22 | 65 → 91 | 14 → 13 | AAA | Albuquerque Chili Peppers | ||
| 2065, Rd #1 | Junior College | P | Brad Burgess | 23 | 58 → 109 | 15 → 14 | Majors | Albuquerque Chili Peppers | G 99, W 5, L 11, S 1, ERA 5.89, IP 200⅓, K 102 | |
| 2064, Rd #3 | High School | 3B | Ignacio Aparicio | 23 | 58 → 80 | 12 | AAA | Albuquerque Chili Peppers | ||