| Draft Selection | Draft Source | Position | Player | Age | SI | Pot | Assignment | Team | Statistics | |
|---|---|---|---|---|---|---|---|---|---|---|
| 2069, Rd #1 | College | P | J.R. Ford | 20 | 64 | 14 | Rookie | San Rafael Americans | ||
| 2068, Rd #7 | College | SS | Randy Gall | 21 | 73 → 76 | 11 | AA | San Rafael Americans | ||
| 2068, Rd #6 | High School | OF | Joseph Morrissey | 18 | 49 | 10 | - | - | ||
| 2068, Rd #5 | Latin American Academy | OF | Edgardo Cortés | 22 | 80 → 83 | 11 → 12 | AAA | San Rafael Americans | ||
| 2068, Rd #4 | Latin American Academy | P | José Ríos | 18 | 49 → 54 | 11 | Rookie | San Rafael Americans | ||
| 2068, Rd #3 | College | P | Archie Hildebrand | 21 | 61 → 66 | 13 | Majors | San Rafael Americans | ||
| 2068, Rd #2 | Latin American Academy | OF | Cristian Chacón | 20 | 77 → 82 | 13 | AA | San Rafael Americans | ||
| 2068, Rd #1 | Latin American Academy | P | Emilio Rentería | 17 | 47 → 53 | 13 | Rookie | San Rafael Americans | ||
| 2067, Rd #8 | Latin American Academy | 1B | Horacío Sanchez | 20 | 63 → 72 | 10 → 11 | AA | San Rafael Americans | ||
| 2067, Rd #7 | High School | P | Jeff Douglas | 19 | 35 → 41 | 10 → 11 | Rookie | San Rafael Americans | ||
| 2067, Rd #6 | Latin American Academy | P | Omar Rios | 22 | 63 | 9 → 10 | - | - | ||
| 2067, Rd #5 | College | P | Paul Petronio | 23 | 52 | 11 → 10 | - | - | ||
| 2066, Rd #3 | High School | 2B | Adam Storey | 20 | 74 → 88 | 15 → 14 | AA | San Rafael Americans | ||
| 2065, Rd #4 | Latin American Academy | P | Carlos Torres | 25 | 53 → 72 | 11 → 12 | Majors | San Rafael Americans | G 4, W 0, L 0, ERA 2.19, IP 12⅓, K 9 | |
| 2065, Rd #2 | High School | P | Carlos Ramos | 21 | 39 → 63 | 12 → 11 | A | San Rafael Americans | ||
| 2064, Rd #3 | High School | OF | Jose Otero | 22 | 64 → 85 | 13 | AAA | San Rafael Americans | ||
| 2064, Rd #2 | High School | 1B | Tyrod Briggs | 22 | 77 → 96 | 13 | Majors | San Rafael Americans | G 33, AVE .600, H 3, R 18, SB 19 | |
| 2064, Rd #1 | Latin American Academy | P | Iván Cañizles | 25 | 51 → 84 | 12 | Majors | San Rafael Americans | G 35, W 2, L 5, ERA 7.38, IP 53⅔, K 53 | |
| 2063, Rd #5 | College | P | Paul Dove | 26 | 59 → 87 | 11 → 12 | Majors | Paradise Valley Cubs | ||
| 2063, Rd #4 | College | SS | Shawn Fujita | 26 | 77 → 112 | 12 → 14 | Majors | San Rafael Americans | G 276, AVE .221, H 216, HR 26, R 107, RBI 120 | |
| 2063, Rd #3 | College | C | Isaac Vernon | 26 | 76 → 95 | 12 → 11 | Majors | San Rafael Americans | G 374, AVE .281, H 301, HR 21, R 124, RBI 102 | |
| 2063, Rd #2 | High School | 2B | Francisco Amaya | 23 | 62 → 88 | 12 → 13 | Majors | San Rafael Americans | G 3, AVE .000 | |
| 2063, Rd #1 | High School | OF | Cliff Knowles | 23 | 68 → 94 | 14 → 13 | Majors | San Rafael Americans | G 150, AVE .248, H 86, HR 8, R 33, RBI 54 | |
| 2062, Rd #8 | Latin American Academy | OF | Roberto Flores | 25 | 48 | 11 → 10 | - | - | ||
| 2062, Rd #7 | International | OF | Rusell Davies | 30 | 66 → 71 | 11 | - | - | ||