| Draft Selection | Draft Source | Position | Player | Age | SI | Pot | Assignment | Team | Statistics | |
|---|---|---|---|---|---|---|---|---|---|---|
| 2070, Rd #4 | Latin American Academy | P | Sebastián Perea | 21 | 52 | 13 | AA | Naperville Emus | ||
| 2070, Rd #3 | Latin American Academy | 3B | José Sanchez | 18 | 78 | 15 | Rookie | Naperville Emus | ||
| 2070, Rd #2 | Junior College | OF | Greg Lange | 19 | 66 → 67 | 13 | A | Naperville Emus | ||
| 2070, Rd #1 | Asian Posting System | OF | Kenji Miura | 21 | 89 → 92 | 14 | AA | Naperville Emus | ||
| 2069, Rd #8 | Latin American Academy | 3B | Norberto Heredia | 22 | 70 → 71 | 10 | AA | Naperville Emus | ||
| 2069, Rd #7 | Latin American Academy | C | Iván De La Cruz | 19 | 58 → 63 | 12 | A | Naperville Emus | ||
| 2069, Rd #4 | Latin American Academy | P | Francisco Rodríguez | 20 | 34 → 36 | 12 | - | - | ||
| 2069, Rd #3 | High School | OF | Arthur Hardin | 18 | 67 → 71 | 15 | Rookie | Naperville Emus | ||
| 2069, Rd #2 | College | P | Jerry Gaffney | 21 | 79 → 89 | 15 | AA | Naperville Emus | G 43, W 3, L 6, ERA 5.06, IP 58⅔, K 28 | |
| 2069, Rd #1 | College | P | Zachary Avery | 21 | 45 → 51 | 13 | AA | Naperville Emus | ||
| 2068, Rd #4 | Latin American Academy | OF | René Morales | 21 | 58 → 70 | 13 | AA | Naperville Emus | ||
| 2068, Rd #3 | College | OF | Tony Keegan | 22 | 76 → 84 | 13 | AAA | Naperville Emus | ||
| 2068, Rd #2 | Latin American Academy | P | Pablo Jiménez | 18 | 36 → 49 | 13 | Rookie | Naperville Emus | ||
| 2068, Rd #1 | High School | 1B | Mark Vest | 19 | 66 → 84 | 13 | AA | Naperville Emus | ||
| 2067, Rd #5 | High School | OF | Anthony Thornton | 20 | 58 → 73 | 12 | AA | Naperville Emus | ||
| 2067, Rd #4 | Junior College | OF | Jonathan Matlock | 21 | 62 → 75 | 13 → 12 | AA | Naperville Emus | ||
| 2067, Rd #3 | College | OF | Herb Zhao | 23 | 57 → 75 | 12 → 11 | - | - | ||
| 2067, Rd #2 | Latin American Academy | C | Emiliano Trujillo | 23 | 64 | 11 | - | - | ||
| 2067, Rd #1 | High School | OF | Linsey Stanton | 20 | 53 → 59 | 12 | - | - | ||
| 2066, Rd #5 | High School | OF | Joe Barbieri | 21 | 55 → 64 | 12 → 11 | - | - | ||
| 2066, Rd #4 | High School | P | Glen Beatty | 21 | 43 → 58 | 12 | AA | Naperville Emus | ||
| 2066, Rd #3 | College | 3B | Kelvin Raymond | 25 | 59 → 60 | 12 → 11 | - | - | ||
| 2066, Rd #2 | College | 1B | Dean Kavanagh | 24 | 80 → 97 | 13 | - | - | ||
| 2066, Rd #1 | High School | 1B | John Cole | 21 | 63 → 91 | 11 → 12 | AAA | Naperville Emus | ||
| 2065, Rd #5 | College | OF | Kent Headley | 25 | 75 → 95 | 13 | - | - | ||